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VHH Antibody Discovery VHH Antibody Discovery

VHH Antibody Discovery

Antibody Discovery
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Accelerate your VHH antibody discovery with Biointron’s 4-5 month timeline.

At Biointron, each program starts with a dedicated alpaca from our 300+ herd to build a deep, target-focused immune response. We construct high-diversity VHH libraries (≥10⁸) and run tailored phage display campaigns to maximize hit rate and epitope coverage. Selected VHHs are expressed and validated by ELISA/SPR/FACS (plus internalization or ADCC when format-appropriate), routinely yielding KD values across ~10⁻⁶–10⁻¹¹ M (assay- and target-dependent). Use your own antigen or have us produce it. Deliverables include a full report, sequence files, affinity/assay data, prioritized hit/lead tables, and purified VHH samples—plus next-step recommendations. All antibodies generated under your project belong to you.

Our antibody discovery services also include:

VHH Antibody Discovery Overview

Transform your research with Biointron's VHH Antibody Discovery Services. From our exclusive alpaca breeding farm to our advanced phage display technology, Biointron delivers high-diversity, single-domain VHH antibodies tailored to your project needs. With 100+ successful projects annually and a dedicated team of experts, we provide a consistent, reliable solution for therapeutic, diagnostic, and environmental applications.

VHH Antibody Discovery Solution

Advantages of our VHH Antibody Discovery Platform

Self-owned Alpaca Breeding Farm

  • 300+ alpacas available
  • One alpaca just for one project

100+ projects delivered/year

  • Various immunization/panning/screening methods
  • Multiple assays for validation (ELISA, SPR, FACS, Internalization, ADCC, etc.)

High Diversity and Large Capacity

  • Maximizing success with high diversity and large capacity
  • Library size at least 108 - 109

Scale, Speed, and Quality—All Under One Roof

Transform your research with Biointron's VHH Antibody Discovery Services. From our exclusive alpaca breeding farm to our advanced phage display technology, Biointron delivers high-diversity, single-domain VHH antibodies tailored to your project needs. With 100+ successful projects annually and a dedicated team of experts, our integrated workflow takes you from antigen to qualified VHH leads with robust QC and proactive communication at every milestone.

End-to-End VHH Programs, Built for You

We combine dedicated-animal immunization, immune library construction (≥10⁸), and target-specific phage display with orthogonal screening to deliver high-confidence binders and ranked leads. Seamless downstream support—humanization, affinity maturation, developability, and small- to large-scale production—helps you advance rapidly into functional studies, formatting, and preclinical evaluation.

Biointron Alpaca VHH Affinity Distribution

  • 0%AF-5
  • 4%AF-6
  • 16%AF-7
  • 33%AF-8
  • 32%AF-9
  • 13%AF-10
  • 2%AF-11
  • 0%AF-12
  • 0%AF-13

Data source: 615 VHH antibodies (as part of our developed VHHs)

Calculation example:

Total number of VHH of affinity 10-9 M from different target
/
Total number of VHH of from different target (615 unique sequence)
=
32%

With the Biointron VHH discovery platform, VHH hits with affinity ranging from 10-8 to 10-11 M have been generated. It should be noted that the presented data represents only a portion of projects from one client and may have sampling bias. The distribution of hits with different affinity may not reflect the variance between different targets. The data is from SPR affinity measurement.

VHH Antibody Discovery Workflow

Antigen expression or provided by client
Animal immunization
PBMC isolation
mRNA Extraction and Reverse Transcription
Library generation
Library screening and Tailored biopanning ( solid phase panning & liquid phase panning)
Positive Clone Sequencing and Sequence Analysis
VHH expression
VHH Validation

Applications of VHH Antibodies

VHH antibodies have been utilized in a wide variety of settings, such as clinical therapeutics and immunodiagnostics, as well as environmental monitoring, due to their differentiated characteristics. For example, Caplacizumab is an antitumor therapeutics for blood disorders, while CAR-T therapy benefits from VHH-based CAR constructs to enhance treatment precision.

VHH Antibody Discovery Service Details

Our phased approach provides structured, reliable antibody discovery:

Service Step Service Description Timeline Deliverables
Phase Ⅰ: Antigen preparation / Antigen validation
  • Antigen can be prepared by BioIntron or provided by our client
2 weeks for preparation / 2-3 days for validation
  • 1mg purified protein antigen
  • If antigen provided by client, it should be at least 4mg with SDS-PAGE >95%, endotoxin level <1EU/mg
Phase Ⅱ: Alpaca immunization and PBMC isolation /preservation
  • 5ml pre-immune bleed
  • the ELISA titer after 2nd, 3rd and 4th immunization will be monitored and the report will send to client
  • the 50ml PMBC after 2nd, 3rd and 4th immunization will be extracted and stored in Trizol
8-10 weeks
  • Alpaca's death caused by antigen, there will be setup fee about $5,000
  • Decision gate: based on the ELISA titer on the 2nd, 3rd and 4th immunization. Our client can decide to use which cell for library generation
Phase Ⅲ: VHH Phage Library Generation
  • RNA extraction and cDNA preparation
  • VHH amplification
  • Electro competent E. coli
  • Library Diversity and capacity measurement
  • clone NO counting and sequencing to measure the capacity of the library
3-4 weeks
  • VHH capacity reach to 108 - 109
Milestone Ⅳ: Library Biopanning and Screening
  • at least 3 round panning (liquid or solid phase panning)
  • ELISA verification, identification and evaluation of positive clones screening
  • positive clone sequencing and sequencing result analysis
3-4 weeks
  • Guarantee to provide at least 20 unique sequence
VHH-Fc Antibody Production
  • Gene synthesis, subcloning, plasmid preparation
  • transient expression and purification
  • QC analysis
2 weeks
  • Purified antibody (SDS-PAGE >95%, endotoxin level <1EU/mg)
Affinity Ranking (optional) Affinity measured by Biacore 8K 0.5 weeks
  • Phase Ⅰ: Antigen preparation / Antigen validation
    Timeline

    2 weeks for preparation / 2-3 days for validation

    Description
    • Antigen can be prepared by BioIntron or provided by our client
    Deliverables
    • 1mg purified protein antigen
    • If antigen provided by client, it should be at least 4mg with SDS-PAGE >95%, endotoxin level <1EU/mg
  • Phase Ⅱ: Alpaca immunization and PBMC isolation /preservation
    Timeline

    8-10 weeks

    Description
    • 5ml pre-immune bleed
    • the ELISA titer after 2nd, 3rd and 4th immunization will be monitored and the report will send to client
    • the 50ml PMBC after 2nd, 3rd and 4th immunization will be extracted and stored in Trizol
    Deliverables
    • Alpaca's death caused by antigen, there will be setup fee about $5,000
    • Decision gate: based on the ELISA titer on the 2nd, 3rd and 4th immunization. Our client can decide to use which cell for library generation
  • Phase Ⅲ: VHH Phage Library Generation
    Timeline

    3-4 weeks

    Description
    • RNA extraction and cDNA preparation
    • VHH amplification
    • Electro competent E. coli
    • Library Diversity and capacity measurement
    • clone NO counting and sequencing to measure the capacity of the library
    Deliverables
    • VHH capacity reach to 108 - 109
  • Milestone Ⅳ: Library Biopanning and Screening
    Timeline

    3-4 weeks

    Description
    • at least 3 round panning (liquid or solid phase panning)
    • ELISA verification, identification and evaluation of positive clones screening
    • positive clone sequencing and sequencing result analysis
    Deliverables
    • Guarantee to provide at least 20 unique sequence
  • VHH-Fc Antibody Production
    Timeline

    2 weeks

    Description
    • Gene synthesis, subcloning, plasmid preparation
    • transient expression and purification
    • QC analysis
    Deliverables
    • Guarantee to provide at least 20 unique sequence
    • Purified antibody (SDS-PAGE >95%, endotoxin level <1EU/mg)
  • Affinity Ranking (optional)
    Timeline

    0.5 weeks

    Description

    Affinity measured by Biacore 8K

Case Study

Biointron’s proven process has achieved substantial outcomes.

Case 1: Anti-X Antigen

After panning and screening, 53 unique sequences were obtained & expressed in the HTP CHO expression system.

Validation of VHHs Binding to X (by ELISA)

vhh-case1-1
vhh-case1-2
vhh-case1-3
vhh-case1-4

49 of 53 VHH Antibodies bound to X (ELISA)

Validation of VHHs affinity with X (by SPR)

vhh-case1-5
  • 5No Binding
  • 9E-7
  • 21E-8
  • 16E-9
  • 2E-10
Affinity range 5.36x10-7 M to 7.66x10-10 M.

48 of 53 VHH Antibodies bound to X (SPR)

Validation of Cell-based VHHs Binding to X (FACS)

vhh-case1-6
vhh-case1-7
vhh-case1-8
vhh-case1-9

43 of 53 VHH Antibodies Bound against CHO-Kl/X Cell

VHHs Agonist Activity Validation

vhh-case1-10

31 of 53 antibodies showed significant agonist activity

VHHs Validation (Blocking assay)

vhh-case1-11
vhh-case1-12
vhh-case1-13
vhh-case1-14

18 of 53 antibodies showed significant blocking activity.

Case 2: VHH Antibody Discovery (Target: Claudin 18.2)

Alpacas were immunized with Claudin 18.2-encoding DNAs, followed by immunizations with Claudin 18.2-overexpressing cells. Alpaca serum taken after immunization manifested specific binding to Claudin 18.2-overexpressing cells (but not to parental ones).

vhh-case2-1
vhh-case2-2
vhh-case2-3
Phage Library construction from PBMC、Library size is ~1.1x1E10、Insert rate >95%
Antigen Immunization
DNA encoding Target A 1&2
CHO-K1-Target A 3, 4, 5
Cell panning Input (CFU/ml) Output Output/Input
1 2.00E+12 9.00E+07 4.50E-05
2 1.33E+12 2.10E+08 2.10E+08
3 2.10E+08 2.10E+08 2.10E+08
Total clone OD450
(293T-Target A) >0.5
OD450
(293T-blank) >0.1
Combined with Target A
clone number
Targeted
Clone %
Unique
0635-Human Target A 88 2 0 2 2.27% 1
0635-Human Target A 88 18 12 6 6.82% 2
0635-Human Target A 88 55 41 14 15.91% 10
vhh-case2-4
vhh-case2-5
vhh-case2-6

Four VHHs obtained specifically bound to human Claudin 18.2, but not to Claudin 18.1.

“As a dedicated scientist in the forefront of VHH antibody discovery, I am proud to contribute to Biointron’s commitment to advancing healthcare through cutting-edge biotechnology. Our VHH antibodies epitomize precision, innovation, and the relentless pursuit of scientific excellence.”
Yang Xiang
Yang Xiang
Antibody Discovery Team

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